biocrnpyler.mechanisms.metabolite

Classes

OneStepPathway([name, mechanism_type])

Initializes a Mechanism instance.
class biocrnpyler.mechanisms.metabolite.OneStepPathway(name='one_step_pathway', mechanism_type='metabolic_pathway')[source]

Initializes a Mechanism instance.

Parameters:

  • name – name of the Mechanism

  • mechanism_type – mechanism_type in string

update_reactions(precursor, product, component=None, part_id=None, k=None, **keywords)[source]

the child class should implement this method.

Returns:

empty list

update_species(precursor, product, **keywords)[source]

the child class should implement this method.

Returns:

empty list